SE68:/S088/M1/D1
From Metabolonote
Sample Set Information
| ID | SE68 |
|---|---|
| Title | Analysis of Ophiorrhiza pumila |
| Description | WT and transgenic lines of Ophiorrhiza pumila were analyzed by LC-FT-ICR-MS. |
| Authors | Takeshi Ara, Daisuke Shibata, Koh Aoki, Nozomu Sakurai, Ryosuke Sasaki, Takashi Asano, Mami Yamazaki, Lab. Genome Biotech, Kazusa DNA Research Institute, Japan; Graduate School of Pharmaceutical Sciences, Chiba University, Japan |
| Reference | Direct submission;
Yamazaki M, Mochida K, Asano T, Nakabayashi R, Chiba M, Udomson N, Yamazaki Y, Goodenowe DB, Sankawa U, Yoshida T, Toyoda A, Totoki Y, Sakaki Y, Góngora-Castillo E, Buell CR, Sakurai T, Saito K. Coupling deep transcriptome analysis with untargeted metabolic profiling in Ophiorrhiza pumila to further the understanding of the biosynthesis of the anti-cancer alkaloid camptothecin and anthraquinones. Plant Cell Physiol 2013 54: 686-96 |
| Comment | NS deposited the metadata, most of which were retrieved from MassBase. For more detailed information, please contact the authors directly or via NS (email: metabolonote [at] kazusa.or.jp).;PMID:23503598 |
Sample Information
| ID | S088 |
|---|---|
| Title | Ophiorrhiza pumila |
| Organism - Scientific Name | Ophiorrhiza pumila |
| Organism - ID | NCBI Taxonomy:157934 |
| Compound - ID | |
| Compound - Source | |
| Preparation | |
| Sample Preparation Details ID | |
| Comment |
Analytical Method Information
| ID | M1 |
|---|---|
| Title | LC-FTICR-MS, ESI Positive analysis |
| Method Details ID | MS1 |
| Sample Amount | |
| Comment | MassBase ID:MDLC1_10622, Method ID:MTLC0618 |
The raw (binary) and near-raw (text) files of this analysis are available at MassBase.
Analytical Method Details Information
| ID | MS1 |
|---|---|
| Title | LC-FTICR-MS, ESI Positive analysis |
| Instrument | LC-FT-ICR-MS; [Agilent 1100 LC (Agilent Technologies); Finnigan LTQ-FT (Thermo Fisher Scientific K.K.)] |
| Instrument Type | LC-FTICR-MS |
| Ionization | ESI |
| Ion Mode | Positive |
| Description | |
| Comment_of_details |
Data Analysis Information
| ID | D1 |
|---|---|
| Title | Auto peak detection by PowerGetBatch |
| Data Analysis Details ID | DS1 |
| Recommended decimal places of m/z | |
| Comment |
Data Analysis Details Information
| ID | DS1 |
|---|---|
| Title | Auto peak detection by PowerGetBatch |
| Description | |
| Comment_of_details |
