SE199:/S21/M90
Sample Set Information
ID | SE199 |
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Title | Untargeted metabolome analysis of rice using LC-MS / LC-MSを用いたイネのノンターゲットメタボローム解析 |
Description | Untargeted metabolome analyses of rice using liquid chromatography-mass spectrometry (LC-MS). Two rice cultivars, Koshichikar and Nipponbare, were used.
The information on the peaks detected in rice was available at the Plant Metabolome Repository website (http://metabolites.in/plants).
検出されたピークは、植物メタボロームレポジトリ (http://metabolites.in/plants) から公開されています。 |
Authors | Sakurai N1,2, Suda K1, Keiichi Kanno3, Soichi Kojima3, Akimoto N1, Hoshi K1, Osawa S1, Ikeda C1, Ozawa K1, Yamada M1, Muneto R1, Shibata D1 (1 Kazusa DNA Research Institute, 2 National Institute of Genetics), Contact: sakurai AT nig.ac.jp (replace AT with @)
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Reference | |
Comment |
Sample Information
ID | S21 |
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Title | Rice (Nipponbare), brown rice |
Organism - Scientific Name | Oryza sativa |
Organism - ID | NCBI taxonomy: 4530 |
Compound - ID | |
Compound - Source | |
Preparation | |
Sample Preparation Details ID | SS1 |
Comment |
Sample Preparation Details Information
ID | SS1 |
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Title | Preparation of the samples |
Description | The rice seeds were provided by Dr. Keiichi Kanno and Dr. Soichi Kojima (Tohoku University). The rice plants were grown in a greenhouse. The brown rice and the leaf blades were harvested, immediately frozen in liquid nitrogen, and stored at -80C. The sample was homogenated using mortar and pestle under liquid nitrogen into a fine powder and stored at -80C until use. |
Comment_of_details |
Analytical Method Information
ID | M90 |
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Title | PSEUDO: Positive, A set of analyses for valid peak selection |
Method Details ID | |
Sample Amount | |
Comment | This metadata represents a set of data obtained below for the convenience of the subsequent data analysis, including peak alignment between the data.
SE199_S21_M011 (http://metabolonote.kazusa.or.jp/SE199:/S21/M011) SE199_S21_M021 (http://metabolonote.kazusa.or.jp/SE199:/S21/M021) SE199_S21_M031 (http://metabolonote.kazusa.or.jp/SE199:/S21/M031) SE199_S21_M041 (http://metabolonote.kazusa.or.jp/SE199:/S21/M041) SE199_S21_M051 (http://metabolonote.kazusa.or.jp/SE199:/S21/M051) SE199_S92_M01 (http://metabolonote.kazusa.or.jp/SE199:/S92/M01) |